IQ-TREE version 1.1.0

Oct 23, 2014

We are pleased to release the major update 1.1 with the following new enhancements:

  • Under-the-hood code optimization for the default likelihood kernel, which gives a speedup up to 5X for DNA and 10X for protein alignments.
  • Support for Windows platforms and support GCC, Clang, MS Visual C++ and Intel C++ compilers.
  • Automatical handling of identical sequences in the alignment (no warnings about identical sequences anymore).
  • Bootstrap and tree search stopping rule combined for more accurate results.
  • Several bugs fixed.
Download version 1.1.0 from GitHub

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