IQ-TREE version 1.6.2

Mar 1, 2018


  • Fix a thread-unsafe bug during partition merging of ModelFinder (reported by Karen Meusemann and Marianne)
  • Fix infinite hanging by LG+C10 or similar models (reported by Craig Herbold)
  • Fix parsing -net option (reported by Cameron Weadick)
  • Fix error message for -fast and -bb

New features:

  • Support reading non-reversible protein Q matrix from a file.
  • New option --write-branches to write branch lengths of tree (and partition trees) into .branches.csv file (requested by Rob Lanfear)
  • Allow -o option to specify a comma-separated list of outgroup taxa (requested by Andrew Roger)
Download version 1.6.2 from GitHub

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